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Small molecules
Two small molecules, simplest, HTML only
Two small molecules with clash detection
and realtime distance calculations
Two small molecules with H
+
transfer
Example of a Diels-Alder reaction
D-glucose: furanose vs. pyranose
Linear L- vs. D-glucose
Macromolecules
Example alpha helix and beta hairpin, HTML only
Standing alpha helix for concurrent visualization in smartphones
Ubiquitin and Ago1's NES in atomistic
description (no Hs), HTML only
Ubiquitin-UIM, simplest HTML only
Ubiquitin-UIM, with voice-controlled forcefield and restraints
Ubiquitin-UIM, same as above plus real-time SAXS profile calculation
Ubiquitin-UIM joined by a 6-residue flexible linker
Real-time paramagnetic NMR simulation in Metmyoglobin
Literature
These AR/VR web apps explained
Why Augmented over Virtual Reality?
Web Apps Come of Age for Molecular Sciences
Augmenting Research, Education, and Outreach with Client-Side Web Programming
Molecular Visualization in the Holodeck @ J. Mol. Biol.2018
Structure and dynamics in multiuser AR @ Sci. Adv. 2018
The matter simulation (r)evolution @ ACS Cent. Sci. 2018
Source of molecules - virtual museum